HMMcopy - Copy number prediction with correction for GC and mappability bias for HTS data
Corrects GC and mappability biases for readcounts (i.e. coverage) in non-overlapping windows of fixed length for single whole genome samples, yielding a rough estimate of copy number for furthur analysis. Designed for rapid correction of high coverage whole genome tumour and normal samples.
Last updated 5 months ago
sequencingpreprocessingvisualizationcopynumbervariationmicroarray
5.87 score 1 dependencies 1 dependents